valpas.visualization.edge_venn_diagram_plot.extract_edges_and_nodes

valpas.visualization.edge_venn_diagram_plot.extract_edges_and_nodes(df, protein1_col='protein_1', protein2_col='protein_2')

Extract edge and node sets from a dataframe

Parameters:

• df (DataFrame) – DataFrame containing edges

• protein1_col (str) – Column name for first protein

• protein2_col (str) – Column name for second protein

Returns:

Tuple of (edge_set, node_set)

Return type:

Tuple[Set, Set]